STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSY19_652Winged helix DNA-binding domain protein; [K] COG1846 Transcriptional regulators. (183 aa)    
Predicted Functional Partners:
BSY19_651
Bacterial extracellular solute-binding s, 5 Middle family protein; [E] COG0747 ABC-type dipeptide transport system, periplasmic component.
 
     0.831
BSY19_865
Winged helix DNA-binding domain protein; [K] COG1846 Transcriptional regulators.
  
     0.718
BSY19_653
Creatinine amidohydrolase family protein; [R] COG1402 Uncharacterized protein, putative amidase.
       0.568
BSY19_654
Binding--dependent transport system inner membrane component family protein; [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.507
BSY19_655
Binding--dependent transport system inner membrane component family protein; [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.507
BSY19_650
Asparaginase family protein; [E] COG1446 Asparaginase.
       0.502
BSY19_649
Ketopantoate reductase PanE/ApbA family protein; [H] COG1893 Ketopantoate reductase.
 
     0.454
AOG06770.1
Response regulator; [T] COG0784 FOG: CheY-like receiver.
  
  
 0.428
AOG03512.1
Binding--dependent transport system inner membrane component family protein; [E] COG1174 ABC-type proline/glycine betaine transport systems, permease component.
  
  
 0.426
AOG05015.1
Binding--dependent transport system inner membrane component family protein; [E] COG1174 ABC-type proline/glycine betaine transport systems, permease component.
  
  
 0.426
Your Current Organism:
Bosea sp. RAC05
NCBI taxonomy Id: 1842539
Other names: B. sp. RAC05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.