STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001956315_02400Unannotated protein. (457 aa)    
Predicted Functional Partners:
GCA_001956315_02399
Unannotated protein.
 
 0.999
GCA_001956315_02401
Unannotated protein.
 
0.999
GCA_001956315_02398
Unannotated protein.
 
 
 0.997
GCA_001956315_02392
Unannotated protein.
 
 0.996
GCA_001956315_02396
Unannotated protein.
 
 
 0.995
GCA_001956315_02395
Unannotated protein.
 
 
0.990
GCA_001956315_01403
Unannotated protein.
  
 0.985
GCA_001956315_02397
Unannotated protein.
 
 0.979
GCA_001956315_02391
Unannotated protein.
 
 
 0.963
GCA_001956315_02393
Unannotated protein.
 
 
 0.956
Your Current Organism:
Sphingomonas montana
NCBI taxonomy Id: 1843236
Other names: CGMCC 1.15646, DSM 103337, S. montana, Sphingomonas montana Manandhar et al. 2018, Sphingomonas sp. W16RD, strain W16RD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.