STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAG66762.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
OAG69252.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OAG66764.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OAG66765.1
Polyvinylalcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OAG69131.1
Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OAG67786.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OAG65723.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.998
OAG69248.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.997
OAG66753.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
OAG66763.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.987
OAG65671.1
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.987
Your Current Organism:
Xanthomonas floridensis
NCBI taxonomy Id: 1843580
Other names: ATCC TSD-60, ICMP 21312, LMG 29665, LMG:29665, NCPPB 4601, X. floridensis, Xanthomonas floridensis Vicente et al. 2017, Xanthomonas sp. WHRI 8848, strain WHRI 8848
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.