Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OIJ28852.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)    
Predicted Functional Partners:
OIJ28907.1
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
OIJ28851.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.793
OIJ28850.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OIJ25266.1
Cation transport regulator ChaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.686
OIJ28853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
OIJ28854.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
       0.554
OIJ27187.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.536
OIJ28310.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
OIJ27416.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
OIJ27419.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
Your Current Organism:
Nocardioides luteus
NCBI taxonomy Id: 1844
Other names: ATCC 43052, CCUG 37986, CIP 103450, DSM 43366, IFO 14491, IMET 7830, JCM 3358, KCTC 9575, LMG 16209, LMG:16209, N. luteus, NBRC 14491
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