STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIJ28609.1Mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)    
Predicted Functional Partners:
OIJ28610.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.914
OIJ28611.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.863
OIJ28612.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.655
OIJ28613.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.642
OIJ25794.1
PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.572
OIJ27417.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.552
OIJ28608.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.549
OIJ23691.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.539
OIJ28342.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.448
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
  
 
   0.436
Your Current Organism:
Nocardioides luteus
NCBI taxonomy Id: 1844
Other names: ATCC 43052, CCUG 37986, CIP 103450, DSM 43366, IFO 14491, IMET 7830, JCM 3358, KCTC 9575, LMG 16209, LMG:16209, N. luteus, NBRC 14491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.