STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UG56_014720ABC transporter permease; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)    
Predicted Functional Partners:
OIJ26047.1
DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.825
OIJ27627.1
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.689
OIJ26801.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.563
OIJ23721.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.503
OIJ23596.1
Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
OIJ24442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.444
OIJ24740.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.438
OIJ26048.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.434
OIJ25291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
OIJ28267.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Nocardioides luteus
NCBI taxonomy Id: 1844
Other names: ATCC 43052, CCUG 37986, CIP 103450, DSM 43366, IFO 14491, IMET 7830, JCM 3358, KCTC 9575, LMG 16209, LMG:16209, N. luteus, NBRC 14491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.