Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
OIJ25044.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)    
Predicted Functional Partners:
OIJ25042.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.714
OIJ27221.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.674
OIJ26746.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.672
OIJ23598.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.672
OIJ27806.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.600
OIJ28489.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.592
OIJ28247.1
3-ketosteroid-9-alpha-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.592
OIJ27608.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.592
OIJ27281.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.592
OIJ25668.1
Hybrid-cluster NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.592
Your Current Organism:
Nocardioides luteus
NCBI taxonomy Id: 1844
Other names: ATCC 43052, CCUG 37986, CIP 103450, DSM 43366, IFO 14491, IMET 7830, JCM 3358, KCTC 9575, LMG 16209, LMG:16209, N. luteus, NBRC 14491
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