Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
OIJ24323.1Alpha-1,2-mannosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (798 aa)    
Predicted Functional Partners:
OIJ24322.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.994
OIJ24324.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.838
OIJ24346.1
N-acyl-D-glucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
OIJ24325.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
     0.796
OIJ24345.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
OIJ24321.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
OIJ24320.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.667
OIJ24318.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.470
OIJ23921.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.467
OIJ24319.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
Your Current Organism:
Nocardioides luteus
NCBI taxonomy Id: 1844
Other names: ATCC 43052, CCUG 37986, CIP 103450, DSM 43366, IFO 14491, IMET 7830, JCM 3358, KCTC 9575, LMG 16209, LMG:16209, N. luteus, NBRC 14491
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