STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UG56_024580O-antigen polymerase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
OIJ26339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.780
OIJ27954.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.745
OIJ28027.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.712
OIJ26305.1
N-acylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.712
OIJ28350.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.694
OIJ28354.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.694
OIJ25369.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.626
OIJ26550.1
Phosphopeptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.625
OIJ26432.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.625
OIJ25229.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.625
Your Current Organism:
Nocardioides luteus
NCBI taxonomy Id: 1844
Other names: ATCC 43052, CCUG 37986, CIP 103450, DSM 43366, IFO 14491, IMET 7830, JCM 3358, KCTC 9575, LMG 16209, LMG:16209, N. luteus, NBRC 14491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.