STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG48512.1Hypothetical protein. (185 aa)    
Predicted Functional Partners:
lolA
Putative outer membrane lipoprotein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
 
 
 0.839
APG45618.1
tonB-like protein.
    
   0.743
APG48140.1
Cell division and transport-associated protein TolA.
    
   0.743
APG48511.1
Hypothetical protein.
       0.549
APG47144.1
Hypothetical protein.
  
     0.528
APG47504.1
Hypothetical protein.
  
     0.491
APG47704.1
Hypothetical protein.
  
     0.452
APG48538.1
Putative saccharopine dehydrogenase (NADP+, L-glutamate-forming).
  
     0.417
APG47676.1
Hypothetical protein.
  
     0.411
APG48826.1
Putative aminotransferase class 3.
  
     0.402
Your Current Organism:
Phaeobacter porticola
NCBI taxonomy Id: 1844006
Other names: DSM 103148, LMG 29594, LMG:29594, P. porticola, Phaeobacter porticola Breider et al. 2017, Phaeobacter sp. P100, Phaeobacter sp. P104, Phaeobacter sp. P97, strain P97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.