STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001683905_01107Unannotated protein. (1619 aa)    
Predicted Functional Partners:
GCA_001683905_01108
Unannotated protein.
 
     0.890
GCA_001683905_02261
Unannotated protein.
  
  
  0.857
GCA_001683905_01136
Unannotated protein.
  
  
  0.811
GCA_001683905_02728
Unannotated protein.
  
    0.736
GCA_001683905_00328
Unannotated protein.
  
    0.702
GCA_001683905_00319
Unannotated protein.
  
     0.698
GCA_001683905_00320
Unannotated protein.
  
     0.633
GCA_001683905_02770
Unannotated protein.
  
     0.630
GCA_001683905_00318
Unannotated protein.
  
    0.629
GCA_001683905_00315
Unannotated protein.
  
     0.622
Your Current Organism:
Marivirga sp. ANTB6
NCBI taxonomy Id: 1844760
Other names: M. sp. ANT-B6, Marivirga sp. ANT-B6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.