STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX71814.16-phospho 3-hexuloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)    
Predicted Functional Partners:
APX71813.1
3-hexulose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
APX71811.1
Gluconate:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.929
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
    
 0.922
pgi
Glucose-6-phosphate isomerase; Functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.
    
 0.921
APX71812.1
2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.914
APX71810.1
Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.911
APX71815.1
Bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.907
fbp
Fructose-1,6-bisphosphatase; Class 3; catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
APX71808.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.751
APX71802.1
Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.723
Your Current Organism:
Lactobacillus allii
NCBI taxonomy Id: 1847728
Other names: JCM 31938, KCTC 21077, L. allii, Lactobacillus allii Jung et al. 2017, Lactobacillus sp. WiKim39, strain WiKim39
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