Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APX72898.1 | APX72899.1 | BTM29_10185 | BTM29_10190 | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | 0.806 |
| APX72898.1 | APX72900.1 | BTM29_10185 | BTM29_10195 | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | HslU--HslV peptidase proteolytic subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.780 |
| APX72898.1 | APX72903.1 | BTM29_10185 | BTM29_10210 | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA protecting protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.512 |
| APX72898.1 | APX72904.1 | BTM29_10185 | BTM29_10220 | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosome biogenesis GTPase YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.455 |
| APX72898.1 | APX72905.1 | BTM29_10185 | BTM29_10225 | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0346 family. | 0.465 |
| APX72898.1 | APX72907.1 | BTM29_10185 | BTM29_10235 | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
| APX72898.1 | rnhB | BTM29_10185 | BTM29_10215 | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.456 |
| APX72898.1 | topA | BTM29_10185 | BTM29_10205 | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.777 |
| APX72898.1 | xerC | BTM29_10185 | BTM29_10200 | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.764 |
| APX72899.1 | APX72898.1 | BTM29_10190 | BTM29_10185 | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.806 |
| APX72899.1 | APX72900.1 | BTM29_10190 | BTM29_10195 | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | HslU--HslV peptidase proteolytic subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.999 |
| APX72899.1 | APX72903.1 | BTM29_10190 | BTM29_10210 | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | DNA protecting protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.598 |
| APX72899.1 | APX72904.1 | BTM29_10190 | BTM29_10220 | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Ribosome biogenesis GTPase YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.545 |
| APX72899.1 | APX72905.1 | BTM29_10190 | BTM29_10225 | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0346 family. | 0.459 |
| APX72899.1 | APX72907.1 | BTM29_10190 | BTM29_10235 | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.470 |
| APX72899.1 | rnhB | BTM29_10190 | BTM29_10215 | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.528 |
| APX72899.1 | topA | BTM29_10190 | BTM29_10205 | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.891 |
| APX72899.1 | xerC | BTM29_10190 | BTM29_10200 | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.898 |
| APX72900.1 | APX72898.1 | BTM29_10195 | BTM29_10185 | HslU--HslV peptidase proteolytic subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.780 |
| APX72900.1 | APX72899.1 | BTM29_10195 | BTM29_10190 | HslU--HslV peptidase proteolytic subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. | 0.999 |
page 1 of 5