Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ95207.1 | SHJ95210.1 | SAMN05443637_101258 | SAMN05443637_101259 | Major Facilitator Superfamily protein. | SagB-type dehydrogenase domain-containing protein. | 0.777 |
SHJ95207.1 | SHJ95224.1 | SAMN05443637_101258 | SAMN05443637_101260 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.803 |
SHJ95207.1 | SHJ95258.1 | SAMN05443637_101258 | SAMN05443637_101261 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.542 |
SHJ95210.1 | SHJ95207.1 | SAMN05443637_101259 | SAMN05443637_101258 | SagB-type dehydrogenase domain-containing protein. | Major Facilitator Superfamily protein. | 0.777 |
SHJ95210.1 | SHJ95224.1 | SAMN05443637_101259 | SAMN05443637_101260 | SagB-type dehydrogenase domain-containing protein. | Hypothetical protein. | 0.904 |
SHJ95210.1 | SHJ95258.1 | SAMN05443637_101259 | SAMN05443637_101261 | SagB-type dehydrogenase domain-containing protein. | Hypothetical protein. | 0.542 |
SHJ95210.1 | SHK08317.1 | SAMN05443637_101259 | SAMN05443637_102315 | SagB-type dehydrogenase domain-containing protein. | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.617 |
SHJ95210.1 | SHK20580.1 | SAMN05443637_101259 | SAMN05443637_103374 | SagB-type dehydrogenase domain-containing protein. | 8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family. | 0.481 |
SHJ95210.1 | SHK87155.1 | SAMN05443637_101259 | SAMN05443637_113158 | SagB-type dehydrogenase domain-containing protein. | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.617 |
SHJ95210.1 | SHK91108.1 | SAMN05443637_101259 | SAMN05443637_11476 | SagB-type dehydrogenase domain-containing protein. | Adenylyltransferase and sulfurtransferase. | 0.629 |
SHJ95210.1 | SHL05441.1 | SAMN05443637_101259 | SAMN05443637_1178 | SagB-type dehydrogenase domain-containing protein. | Probable phosphoglycerate mutase. | 0.513 |
SHJ95210.1 | SHL15015.1 | SAMN05443637_101259 | SAMN05443637_11976 | SagB-type dehydrogenase domain-containing protein. | Uroporphyrinogen III methyltransferase / synthase. | 0.611 |
SHJ95224.1 | SHJ95207.1 | SAMN05443637_101260 | SAMN05443637_101258 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.803 |
SHJ95224.1 | SHJ95210.1 | SAMN05443637_101260 | SAMN05443637_101259 | Hypothetical protein. | SagB-type dehydrogenase domain-containing protein. | 0.904 |
SHJ95224.1 | SHJ95258.1 | SAMN05443637_101260 | SAMN05443637_101261 | Hypothetical protein. | Hypothetical protein. | 0.542 |
SHJ95258.1 | SHJ95207.1 | SAMN05443637_101261 | SAMN05443637_101258 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.542 |
SHJ95258.1 | SHJ95210.1 | SAMN05443637_101261 | SAMN05443637_101259 | Hypothetical protein. | SagB-type dehydrogenase domain-containing protein. | 0.542 |
SHJ95258.1 | SHJ95224.1 | SAMN05443637_101261 | SAMN05443637_101260 | Hypothetical protein. | Hypothetical protein. | 0.542 |
SHK08317.1 | SHJ95210.1 | SAMN05443637_102315 | SAMN05443637_101259 | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | SagB-type dehydrogenase domain-containing protein. | 0.617 |
SHK08317.1 | SHK87155.1 | SAMN05443637_102315 | SAMN05443637_113158 | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.982 |
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