Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK07100.1 | SHK07127.1 | SAMN05443637_102259 | SAMN05443637_102260 | Alcohol dehydrogenase, class IV. | FAD/FMN-containing dehydrogenase. | 0.722 |
SHK07100.1 | SHK17791.1 | SAMN05443637_102259 | SAMN05443637_103231 | Alcohol dehydrogenase, class IV. | Hypothetical protein. | 0.709 |
SHK07100.1 | SHK75420.1 | SAMN05443637_102259 | SAMN05443637_111146 | Alcohol dehydrogenase, class IV. | Alcohol dehydrogenase, propanol-preferring. | 0.843 |
SHK07100.1 | SHK76300.1 | SAMN05443637_102259 | SAMN05443637_111189 | Alcohol dehydrogenase, class IV. | acetyl-CoA carboxylase carboxyl transferase subunit beta. | 0.694 |
SHK07100.1 | SHK79046.1 | SAMN05443637_102259 | SAMN05443637_11240 | Alcohol dehydrogenase, class IV. | NAD+-dependent secondary alcohol dehydrogenase Adh1. | 0.733 |
SHK07100.1 | SHL07181.1 | SAMN05443637_102259 | SAMN05443637_11789 | Alcohol dehydrogenase, class IV. | Alcohol dehydrogenase, propanol-preferring. | 0.733 |
SHK07100.1 | SHL14059.1 | SAMN05443637_102259 | SAMN05443637_11922 | Alcohol dehydrogenase, class IV. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.769 |
SHK07100.1 | SHL20775.1 | SAMN05443637_102259 | SAMN05443637_12112 | Alcohol dehydrogenase, class IV. | Glutamate synthase (NADPH/NADH) large chain. | 0.722 |
SHK07100.1 | SHL36060.1 | SAMN05443637_102259 | SAMN05443637_12589 | Alcohol dehydrogenase, class IV. | Acetaldehyde dehydrogenase. | 0.974 |
SHK07100.1 | SHL42687.1 | SAMN05443637_102259 | SAMN05443637_12835 | Alcohol dehydrogenase, class IV. | Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.715 |
SHK07127.1 | SHK07100.1 | SAMN05443637_102260 | SAMN05443637_102259 | FAD/FMN-containing dehydrogenase. | Alcohol dehydrogenase, class IV. | 0.722 |
SHK07127.1 | SHK76300.1 | SAMN05443637_102260 | SAMN05443637_111189 | FAD/FMN-containing dehydrogenase. | acetyl-CoA carboxylase carboxyl transferase subunit beta. | 0.733 |
SHK07127.1 | SHL14059.1 | SAMN05443637_102260 | SAMN05443637_11922 | FAD/FMN-containing dehydrogenase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.941 |
SHK07127.1 | SHL20775.1 | SAMN05443637_102260 | SAMN05443637_12112 | FAD/FMN-containing dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.974 |
SHK07127.1 | SHL36060.1 | SAMN05443637_102260 | SAMN05443637_12589 | FAD/FMN-containing dehydrogenase. | Acetaldehyde dehydrogenase. | 0.432 |
SHK07127.1 | SHL42687.1 | SAMN05443637_102260 | SAMN05443637_12835 | FAD/FMN-containing dehydrogenase. | Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.944 |
SHK17791.1 | SHK07100.1 | SAMN05443637_103231 | SAMN05443637_102259 | Hypothetical protein. | Alcohol dehydrogenase, class IV. | 0.709 |
SHK17791.1 | SHL36060.1 | SAMN05443637_103231 | SAMN05443637_12589 | Hypothetical protein. | Acetaldehyde dehydrogenase. | 0.622 |
SHK75420.1 | SHK07100.1 | SAMN05443637_111146 | SAMN05443637_102259 | Alcohol dehydrogenase, propanol-preferring. | Alcohol dehydrogenase, class IV. | 0.843 |
SHK75420.1 | SHK79046.1 | SAMN05443637_111146 | SAMN05443637_11240 | Alcohol dehydrogenase, propanol-preferring. | NAD+-dependent secondary alcohol dehydrogenase Adh1. | 0.766 |
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