STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK08452.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (259 aa)    
Predicted Functional Partners:
SHL52055.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.701
SHL20775.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.688
SHK23856.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.648
SHK09818.1
CDP-4-dehydro-6-deoxyglucose reductase/toluene monooxygenase electron transfer component.
  
 0.630
SHK19804.1
Ferredoxin-NADP reductase.
   
 0.584
SHK62540.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.584
SHK68453.1
Ferredoxin-NADP reductase.
   
 0.584
SHK76300.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
 
 0.570
SHK23810.1
[acyl-carrier-protein] S-malonyltransferase.
  
 0.559
SHK08432.1
DNA-binding transcriptional regulator, IclR family.
  
    0.548
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.