STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK02071.1Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (184 aa)    
Predicted Functional Partners:
SHK02104.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.973
SHK02078.1
Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
     0.935
SHL06755.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.927
SHK09183.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.925
SHK80839.1
Ribose transport system substrate-binding protein.
 
 0.925
SHK80802.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.920
SHJ98274.1
D-xylose transport system ATP-binding protein.
 
 0.917
SHK09205.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.916
SHK02123.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
 
 0.877
SHK04490.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.821
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.