STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK15475.1acetyl-CoA C-acetyltransferase. (493 aa)    
Predicted Functional Partners:
SHK97355.1
PAS domain S-box-containing protein.
    
 0.933
SHK15499.1
acyl-CoA dehydrogenase.
  
  0.900
SHK02890.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
  0.709
SHL10922.1
PAS domain S-box-containing protein.
    
 0.690
SHK02804.1
acyl-CoA dehydrogenase.
  
  0.685
SHK18766.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.679
SHK69450.1
Acyl-coenzyme A oxidase.
   
  0.679
SHL24171.1
acyl-CoA dehydrogenase.
   
  0.676
SHJ92763.1
Enoyl-CoA hydratase.
 
  
  0.667
SHJ94755.1
acyl-CoA dehydrogenase.
   
  0.655
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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