STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK18380.1(R)-ethylmalonyl-CoA mutase. (664 aa)    
Predicted Functional Partners:
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
0.999
SHJ97211.1
methylmalonyl-CoA mutase.
 
0.996
SHJ97193.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
 
0.995
SHK18840.1
methylmalonyl-CoA epimerase.
  
 0.979
SHL14059.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.979
SHL42687.1
Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.976
SHK18880.1
LAO/AO transport system kinase.
  
 0.964
SHJ97174.1
LAO/AO transport system kinase.
 
  
 0.963
SHK27998.1
Indolepyruvate ferredoxin oxidoreductase.
    
 0.914
SHK36571.1
Indolepyruvate ferredoxin oxidoreductase.
    
 0.914
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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