Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK19097.1 | SHK19114.1 | SAMN05443637_103298 | SAMN05443637_103299 | Maltokinase. | Trehalose synthase. | 0.999 |
SHK19097.1 | SHK19155.1 | SAMN05443637_103298 | SAMN05443637_103301 | Maltokinase. | Starch phosphorylase. | 0.893 |
SHK19097.1 | SHK19222.1 | SAMN05443637_103298 | SAMN05443637_103304 | Maltokinase. | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 0.801 |
SHK19097.1 | SHK19462.1 | SAMN05443637_103298 | SAMN05443637_103316 | Maltokinase. | 1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 57 family. | 0.566 |
SHK19097.1 | SHK70941.1 | SAMN05443637_103298 | SAMN05443637_110210 | Maltokinase. | Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.916 |
SHK19097.1 | SHK84167.1 | SAMN05443637_103298 | SAMN05443637_11315 | Maltokinase. | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 0.833 |
SHK19097.1 | SHK84193.1 | SAMN05443637_103298 | SAMN05443637_11316 | Maltokinase. | Maltooligosyl trehalose synthase. | 0.956 |
SHK19097.1 | SHK84198.1 | SAMN05443637_103298 | SAMN05443637_11317 | Maltokinase. | Maltooligosyl trehalose hydrolase. | 0.940 |
SHK19097.1 | glgB | SAMN05443637_103298 | SAMN05443637_103297 | Maltokinase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.996 |
SHK19097.1 | glgC | SAMN05443637_103298 | SAMN05443637_114122 | Maltokinase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.884 |
SHK19114.1 | SHK19097.1 | SAMN05443637_103299 | SAMN05443637_103298 | Trehalose synthase. | Maltokinase. | 0.999 |
SHK19114.1 | SHK19155.1 | SAMN05443637_103299 | SAMN05443637_103301 | Trehalose synthase. | Starch phosphorylase. | 0.967 |
SHK19114.1 | SHK19222.1 | SAMN05443637_103299 | SAMN05443637_103304 | Trehalose synthase. | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 0.934 |
SHK19114.1 | SHK19462.1 | SAMN05443637_103299 | SAMN05443637_103316 | Trehalose synthase. | 1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 57 family. | 0.822 |
SHK19114.1 | SHK70941.1 | SAMN05443637_103299 | SAMN05443637_110210 | Trehalose synthase. | Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.896 |
SHK19114.1 | SHK84167.1 | SAMN05443637_103299 | SAMN05443637_11315 | Trehalose synthase. | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 0.918 |
SHK19114.1 | SHK84193.1 | SAMN05443637_103299 | SAMN05443637_11316 | Trehalose synthase. | Maltooligosyl trehalose synthase. | 0.988 |
SHK19114.1 | SHK84198.1 | SAMN05443637_103299 | SAMN05443637_11317 | Trehalose synthase. | Maltooligosyl trehalose hydrolase. | 0.989 |
SHK19114.1 | glgB | SAMN05443637_103299 | SAMN05443637_103297 | Trehalose synthase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.987 |
SHK19114.1 | glgC | SAMN05443637_103299 | SAMN05443637_114122 | Trehalose synthase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.867 |
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