STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK37571.1Sugar lactone lactonase YvrE. (293 aa)    
Predicted Functional Partners:
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
 0.633
ilvD-2
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
 0.633
SHL20947.1
Gluconokinase.
    
 0.614
SHK37548.1
Cyclohexanone monooxygenase.
  
 
  0.585
SHL22095.1
Predicted dehydrogenase.
  
 
 0.557
SHK37595.1
fatty-acyl-CoA synthase.
   
   0.545
SHK37492.1
Protein of unknown function.
  
  
  0.481
SHK10153.1
Predicted dehydrogenase.
 
 
 0.476
SHK97562.1
Predicted dehydrogenase.
 
 
 0.476
SHK09381.1
Choline dehydrogenase.
 
 
 0.456
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.