STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK59137.1Dihydrolipoamide dehydrogenase. (469 aa)    
Predicted Functional Partners:
SHK03614.1
2-oxoglutarate decarboxylase.
 
 0.998
SHJ97729.1
2-oxoisovalerate dehydrogenase E1 component.
 
 0.985
SHK27018.1
2-oxoglutarate dehydrogenase E2 component.
 0.975
SHK04100.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.961
SHL44962.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.961
SHK04084.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.950
SHL44978.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.949
SHK04069.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 
 0.879
SHL45009.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 
 0.875
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
  
 0.850
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.