STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK59679.1NAD(P)H-dependent FMN reductase. (229 aa)    
Predicted Functional Partners:
SHK59694.1
Leucine-zipper of insertion element IS481.
       0.773
SHK53084.1
Fumarate reductase flavoprotein subunit.
    
  0.659
SHK15179.1
Cytochrome P450 / NADPH-cytochrome P450 reductase.
     
 0.600
SHK72726.1
Glyoxylase, beta-lactamase superfamily II.
    
 0.569
SHK59650.1
AraC-type DNA-binding protein.
       0.564
SHK05367.1
Sulfate adenylyltransferase subunit 2.
   
 
 0.549
SHK59646.1
CubicO group peptidase, beta-lactamase class C family.
       0.491
SHK59580.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
  
 
  0.469
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
    
 0.453
SHK59619.1
NitT/TauT family transport system ATP-binding protein.
  
 
  0.442
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.