STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK65341.1Cellobiose ABC transporter membrane protein. (304 aa)    
Predicted Functional Partners:
SHK65322.1
Cellobiose ABC transporter membrane protein.
 0.996
SHK65300.1
Cellobiose transport system substrate-binding protein.
 
 0.991
SHK15785.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.983
SHK43684.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.981
SHK97194.1
N-acetylglucosamine transport system permease protein.
 
 0.979
SHL26014.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.979
SHK07624.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.978
SHK15825.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.958
SHK86122.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.955
SHK07660.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.954
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.