STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK75163.1Hypothetical protein. (342 aa)    
Predicted Functional Partners:
SHK75185.1
Nucleotide-binding universal stress protein, UspA family.
 
    0.812
SHL43134.1
Hypothetical protein.
 
  
 0.744
SHK38153.1
Sigma 54 modulation/S30EA ribosomal protein C terminus.
  
    0.715
SHJ92484.1
CBS domain-containing protein.
   
  
 0.704
SHK02280.1
MFS transporter, NNP family, nitrate/nitrite transporter.
   
  
 0.700
SHL43096.1
Nitroreductase family protein.
 
   
0.689
SHK74823.1
Nitroreductase family protein.
 
   
0.684
SHK75141.1
CBS domain-containing protein.
       0.655
SHK75198.1
Hypothetical protein.
 
   
 0.641
SHK91108.1
Adenylyltransferase and sulfurtransferase.
    
 0.629
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.