STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK80564.1Hypothetical protein. (814 aa)    
Predicted Functional Partners:
SHK80582.1
ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family.
    
 0.935
SHL32457.1
Hypothetical protein.
 
 
   0.776
SHL00339.1
Anti-sigma-D factor RsdA to sigma factor binding region.
  
 
 
 0.771
SHK82141.1
Hypothetical protein.
  
   
 0.758
SHL18897.1
Heparin binding hemagglutinin HbhA.
  
     0.757
SHK93223.1
Hypothetical protein.
  
     0.754
SHK93180.1
Hypothetical protein.
  
     0.748
SHK80519.1
Hypothetical protein.
 
   
 0.747
SHL51082.1
Protein of unknown function.
  
     0.744
SHL41205.1
Hypothetical protein.
  
     0.738
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.