Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK76040.1 | SHK82180.1 | SAMN05443637_111176 | SAMN05443637_112195 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase. | 0.428 |
SHK82141.1 | SHK82180.1 | SAMN05443637_112193 | SAMN05443637_112195 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase. | 0.418 |
SHK82141.1 | SHK82195.1 | SAMN05443637_112193 | SAMN05443637_112196 | Hypothetical protein. | NAD(P)H-flavin reductase; Belongs to the globin family. | 0.916 |
SHK82141.1 | clpB | SAMN05443637_112193 | SAMN05443637_112194 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.511 |
SHK82180.1 | SHK76040.1 | SAMN05443637_112195 | SAMN05443637_111176 | Pyridoxamine 5'-phosphate oxidase. | Hypothetical protein. | 0.428 |
SHK82180.1 | SHK82141.1 | SAMN05443637_112195 | SAMN05443637_112193 | Pyridoxamine 5'-phosphate oxidase. | Hypothetical protein. | 0.418 |
SHK82180.1 | SHK82195.1 | SAMN05443637_112195 | SAMN05443637_112196 | Pyridoxamine 5'-phosphate oxidase. | NAD(P)H-flavin reductase; Belongs to the globin family. | 0.535 |
SHK82180.1 | clpB | SAMN05443637_112195 | SAMN05443637_112194 | Pyridoxamine 5'-phosphate oxidase. | ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.516 |
SHK82195.1 | SHK82141.1 | SAMN05443637_112196 | SAMN05443637_112193 | NAD(P)H-flavin reductase; Belongs to the globin family. | Hypothetical protein. | 0.916 |
SHK82195.1 | SHK82180.1 | SAMN05443637_112196 | SAMN05443637_112195 | NAD(P)H-flavin reductase; Belongs to the globin family. | Pyridoxamine 5'-phosphate oxidase. | 0.535 |
clpB | SHK82141.1 | SAMN05443637_112194 | SAMN05443637_112193 | ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | Hypothetical protein. | 0.511 |
clpB | SHK82180.1 | SAMN05443637_112194 | SAMN05443637_112195 | ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | Pyridoxamine 5'-phosphate oxidase. | 0.516 |