STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK90754.1Lipase. (283 aa)    
Predicted Functional Partners:
SHK90795.1
O(6)-alkylguanine repair protein YbaZ.
       0.797
SHK33196.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.721
SHK43273.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.720
SHL12533.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.693
SHK33132.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.683
SHL11597.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.633
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.617
SHL17826.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.609
SHK02698.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
    
  0.596
SHK91199.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
   
 0.581
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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