STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK98305.1MoxR-like ATPase. (327 aa)    
Predicted Functional Partners:
SHK98275.1
Protein of unknown function DUF58.
  
 0.958
SHK98264.1
Ca-activated chloride channel family protein.
 
 
 0.934
SHK98233.1
Ca-activated chloride channel family protein.
 
 
 0.836
SHJ95464.1
Protein of unknown function DUF58.
  
 0.805
SHK98325.1
Trypsin-like peptidase domain-containing protein.
       0.746
SHJ95440.1
Ca-activated chloride channel family protein.
 
 
 0.643
SHK98346.1
Transcriptional regulator, HxlR family.
  
    0.496
SHK87297.1
Protoporphyrin IX magnesium-chelatase.
  
 
 0.489
SHK98365.1
Uncharacterized domain 1-containing protein.
       0.487
SHK85775.1
Transglutaminase-like enzyme, putative cysteine protease.
 
     0.454
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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