STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL04014.1NADH oxidase (H2O2-forming). (444 aa)    
Predicted Functional Partners:
SHK03614.1
2-oxoglutarate decarboxylase.
  
 0.996
SHJ97729.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.982
SHK04100.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 0.899
SHK27018.1
2-oxoglutarate dehydrogenase E2 component.
  
 0.886
SHL44962.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 0.886
SHK04084.1
Pyruvate dehydrogenase E1 component beta subunit.
  
 0.878
SHL44978.1
Pyruvate dehydrogenase E1 component beta subunit.
  
 0.878
SHK41880.1
Thioredoxin.
  
 0.840
SHL20775.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.838
SHK26274.1
Thiol-disulfide isomerase or thioredoxin.
   
 0.819
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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