STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL00385.1Two component transcriptional regulator, LuxR family. (198 aa)    
Predicted Functional Partners:
SHJ97481.1
Signal transduction histidine kinase.
   
 0.915
SHL10922.1
PAS domain S-box-containing protein.
  
 0.870
SHK15049.1
GAF domain-containing protein.
 
 0.863
SHK24839.1
Signal transduction histidine kinase.
 
 0.846
SHL26079.1
Signal transduction histidine kinase.
 
 0.846
SHK68000.1
Signal transduction histidine kinase.
 
 0.830
SHK03778.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.829
SHK86843.1
Two-component system, NarL family, sensor histidine kinase DesK.
 
 0.824
SHK97355.1
PAS domain S-box-containing protein.
   
 0.818
SHK97995.1
Two-component system, NarL family, sensor histidine kinase UhpB.
 
 0.814
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.