Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK02737.1 | SHK27809.1 | SAMN05443637_10239 | SAMN05443637_104197 | Acetyl esterase/lipase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.659 |
SHK02737.1 | SHL07751.1 | SAMN05443637_10239 | SAMN05443637_117121 | Acetyl esterase/lipase. | Acetyl esterase. | 0.772 |
SHK02737.1 | SHL14316.1 | SAMN05443637_10239 | SAMN05443637_11936 | Acetyl esterase/lipase. | NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.700 |
SHK02737.1 | SHL14328.1 | SAMN05443637_10239 | SAMN05443637_11937 | Acetyl esterase/lipase. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.655 |
SHK02737.1 | SHL14347.1 | SAMN05443637_10239 | SAMN05443637_11938 | Acetyl esterase/lipase. | NADH dehydrogenase subunit E. | 0.681 |
SHK02737.1 | SHL15779.1 | SAMN05443637_10239 | SAMN05443637_119118 | Acetyl esterase/lipase. | NADH dehydrogenase subunit F. | 0.655 |
SHK02737.1 | SHL26164.1 | SAMN05443637_10239 | SAMN05443637_122121 | Acetyl esterase/lipase. | Formate dehydrogenase gamma subunit. | 0.681 |
SHK27809.1 | SHK02737.1 | SAMN05443637_104197 | SAMN05443637_10239 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Acetyl esterase/lipase. | 0.659 |
SHK27809.1 | SHL07751.1 | SAMN05443637_104197 | SAMN05443637_117121 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Acetyl esterase. | 0.659 |
SHK27809.1 | SHL07771.1 | SAMN05443637_104197 | SAMN05443637_117122 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Kynurenine formamidase. | 0.637 |
SHK27809.1 | SHL14316.1 | SAMN05443637_104197 | SAMN05443637_11936 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.790 |
SHK27809.1 | SHL14328.1 | SAMN05443637_104197 | SAMN05443637_11937 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.745 |
SHK27809.1 | SHL14347.1 | SAMN05443637_104197 | SAMN05443637_11938 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | NADH dehydrogenase subunit E. | 0.771 |
SHK27809.1 | SHL15779.1 | SAMN05443637_104197 | SAMN05443637_119118 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | NADH dehydrogenase subunit F. | 0.745 |
SHK27809.1 | SHL26164.1 | SAMN05443637_104197 | SAMN05443637_122121 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Formate dehydrogenase gamma subunit. | 0.771 |
SHL07720.1 | SHL07751.1 | SAMN05443637_117120 | SAMN05443637_117121 | Probable F420-dependent oxidoreductase, Rv2161c family. | Acetyl esterase. | 0.737 |
SHL07720.1 | SHL07771.1 | SAMN05443637_117120 | SAMN05443637_117122 | Probable F420-dependent oxidoreductase, Rv2161c family. | Kynurenine formamidase. | 0.721 |
SHL07720.1 | SHL07789.1 | SAMN05443637_117120 | SAMN05443637_117123 | Probable F420-dependent oxidoreductase, Rv2161c family. | Luciferase-like monooxygenase. | 0.761 |
SHL07751.1 | SHK02737.1 | SAMN05443637_117121 | SAMN05443637_10239 | Acetyl esterase. | Acetyl esterase/lipase. | 0.772 |
SHL07751.1 | SHK27809.1 | SAMN05443637_117121 | SAMN05443637_104197 | Acetyl esterase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.659 |
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