Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK51540.1 | SHK51650.1 | SAMN05443637_107132 | SAMN05443637_107137 | Hypothetical protein. | DNA-binding transcriptional regulator, IclR family. | 0.773 |
SHK51540.1 | SHL11634.1 | SAMN05443637_107132 | SAMN05443637_118112 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SHK51650.1 | SHK51540.1 | SAMN05443637_107137 | SAMN05443637_107132 | DNA-binding transcriptional regulator, IclR family. | Hypothetical protein. | 0.773 |
SHK51650.1 | SHL11634.1 | SAMN05443637_107137 | SAMN05443637_118112 | DNA-binding transcriptional regulator, IclR family. | Hypothetical protein. | 0.719 |
SHK51650.1 | SHL11663.1 | SAMN05443637_107137 | SAMN05443637_118113 | DNA-binding transcriptional regulator, IclR family. | Hypothetical protein. | 0.673 |
SHK51650.1 | SHL11723.1 | SAMN05443637_107137 | SAMN05443637_118116 | DNA-binding transcriptional regulator, IclR family. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.459 |
SHL11578.1 | SHL11597.1 | SAMN05443637_118109 | SAMN05443637_118110 | Pimeloyl-ACP methyl ester carboxylesterase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.846 |
SHL11578.1 | SHL11614.1 | SAMN05443637_118109 | SAMN05443637_118111 | Pimeloyl-ACP methyl ester carboxylesterase. | Glutaconate CoA-transferase subunit B. | 0.787 |
SHL11578.1 | SHL11634.1 | SAMN05443637_118109 | SAMN05443637_118112 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.553 |
SHL11578.1 | SHL11663.1 | SAMN05443637_118109 | SAMN05443637_118113 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.556 |
SHL11578.1 | SHL11684.1 | SAMN05443637_118109 | SAMN05443637_118114 | Pimeloyl-ACP methyl ester carboxylesterase. | Lipocalin-like domain-containing protein. | 0.642 |
SHL11578.1 | SHL11709.1 | SAMN05443637_118109 | SAMN05443637_118115 | Pimeloyl-ACP methyl ester carboxylesterase. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.475 |
SHL11578.1 | SHL11723.1 | SAMN05443637_118109 | SAMN05443637_118116 | Pimeloyl-ACP methyl ester carboxylesterase. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.475 |
SHL11578.1 | SHL11748.1 | SAMN05443637_118109 | SAMN05443637_118117 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.475 |
SHL11597.1 | SHL11578.1 | SAMN05443637_118110 | SAMN05443637_118109 | Pimeloyl-ACP methyl ester carboxylesterase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.846 |
SHL11597.1 | SHL11614.1 | SAMN05443637_118110 | SAMN05443637_118111 | Pimeloyl-ACP methyl ester carboxylesterase. | Glutaconate CoA-transferase subunit B. | 0.819 |
SHL11597.1 | SHL11634.1 | SAMN05443637_118110 | SAMN05443637_118112 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.611 |
SHL11597.1 | SHL11663.1 | SAMN05443637_118110 | SAMN05443637_118113 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.641 |
SHL11597.1 | SHL11684.1 | SAMN05443637_118110 | SAMN05443637_118114 | Pimeloyl-ACP methyl ester carboxylesterase. | Lipocalin-like domain-containing protein. | 0.688 |
SHL11597.1 | SHL11709.1 | SAMN05443637_118110 | SAMN05443637_118115 | Pimeloyl-ACP methyl ester carboxylesterase. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.572 |
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