STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL15283.1DNA binding domain-containing protein, excisionase family. (69 aa)    
Predicted Functional Partners:
SHL20775.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.795
SHL14059.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.788
SHK76300.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
  
  0.722
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.609
SHL15337.1
Sugar phosphate isomerase/epimerase.
  
    0.560
SHL15325.1
Acyl-coenzyme A thioesterase PaaI, contains HGG motif.
       0.553
SHL15367.1
Ppx/GppA phosphatase.
       0.549
SHL15233.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.528
SHL15247.1
UDP-glucose 4-epimerase.
       0.528
SHL15359.1
Hypothetical protein.
       0.513
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.