Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK08170.1 | SHK08226.1 | SAMN05443637_102308 | SAMN05443637_102311 | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | precorrin-6A reductase. | 0.954 |
SHK08170.1 | SHL17679.1 | SAMN05443637_102308 | SAMN05443637_12015 | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | precorrin-8X methylmutase. | 0.978 |
SHK08170.1 | SHL17698.1 | SAMN05443637_102308 | SAMN05443637_12016 | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase. | 0.931 |
SHK08170.1 | SHL17716.1 | SAMN05443637_102308 | SAMN05443637_12017 | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | precorrin-6A reductase. | 0.929 |
SHK08170.1 | SHL17728.1 | SAMN05443637_102308 | SAMN05443637_12018 | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.968 |
SHK08170.1 | SHL17749.1 | SAMN05443637_102308 | SAMN05443637_12019 | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.977 |
SHK08170.1 | cbiD | SAMN05443637_102308 | SAMN05443637_102312 | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.927 |
SHK08170.1 | cobB | SAMN05443637_102308 | SAMN05443637_102306 | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.919 |
SHK08170.1 | cobD | SAMN05443637_102308 | SAMN05443637_113168 | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.851 |
SHK08170.1 | cobQ | SAMN05443637_102308 | SAMN05443637_113166 | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.965 |
SHK08226.1 | SHK08170.1 | SAMN05443637_102311 | SAMN05443637_102308 | precorrin-6A reductase. | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | 0.954 |
SHK08226.1 | SHL17679.1 | SAMN05443637_102311 | SAMN05443637_12015 | precorrin-6A reductase. | precorrin-8X methylmutase. | 0.982 |
SHK08226.1 | SHL17698.1 | SAMN05443637_102311 | SAMN05443637_12016 | precorrin-6A reductase. | Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase. | 0.994 |
SHK08226.1 | SHL17728.1 | SAMN05443637_102311 | SAMN05443637_12018 | precorrin-6A reductase. | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.969 |
SHK08226.1 | SHL17749.1 | SAMN05443637_102311 | SAMN05443637_12019 | precorrin-6A reductase. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.988 |
SHK08226.1 | cbiD | SAMN05443637_102311 | SAMN05443637_102312 | precorrin-6A reductase. | cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.982 |
SHK08226.1 | cobB | SAMN05443637_102311 | SAMN05443637_102306 | precorrin-6A reductase. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.865 |
SHK08226.1 | cobD | SAMN05443637_102311 | SAMN05443637_113168 | precorrin-6A reductase. | Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.731 |
SHK08226.1 | cobQ | SAMN05443637_102311 | SAMN05443637_113166 | precorrin-6A reductase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.905 |
SHL17679.1 | SHK08170.1 | SAMN05443637_12015 | SAMN05443637_102308 | precorrin-8X methylmutase. | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase. | 0.978 |
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