STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL20822.1Hypothetical protein. (211 aa)    
Predicted Functional Partners:
SHK41409.1
Z1 domain-containing protein.
    
 0.647
SHL50719.1
Aminopeptidase S.
     
 0.585
SHK53506.1
L-fuculose-phosphate aldolase.
    
  0.582
SHK63681.1
L-fuculose 1-phosphate aldolase.
    
  0.582
SHL06494.1
3,4-dihydroxyphthalate decarboxylase.
    
  0.582
SHL11976.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
    
  0.582
SHL20811.1
Transcriptional regulator, HxlR family.
       0.579
SHK58428.1
Ankyrin repeat-containing protein.
  
  
  0.550
SHJ94931.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
    
  0.487
SHK97974.1
SPFH domain / Band 7 family protein.
    
  0.487
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.