STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL37797.1Transcriptional regulator, GntR family. (233 aa)    
Predicted Functional Partners:
SHK56431.1
DNA-binding transcriptional regulator, GntR family.
  
     0.772
SHK10252.1
DNA-binding transcriptional regulator, GntR family.
  
     0.769
SHK46791.1
Transcriptional regulator, GntR family.
  
     0.769
SHK51820.1
Transcriptional regulator, GntR family.
  
     0.769
SHL43016.1
Transcriptional regulator, GntR family.
  
     0.768
SHK70151.1
Transcriptional regulator, GntR family.
  
  
 0.747
SHL37833.1
Sensor histidine kinase inhibitor, KipI family.
       0.578
pxpA
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.556
SHL36334.1
Transcriptional regulator, GntR family.
  
  
 0.523
SHK96322.1
Transcriptional regulator, GntR family.
  
  
 0.485
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.