STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxpAUPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (253 aa)    
Predicted Functional Partners:
SHL37833.1
Sensor histidine kinase inhibitor, KipI family.
 
 0.999
SHL43045.1
Urea carboxylase.
  
 
 0.993
SHK27226.1
Glutamine synthetase.
   
 
  0.895
SHK27468.1
Glutamine synthetase.
   
 
  0.895
SHK94979.1
Glutamate dehydrogenase (NAD).
    
  0.864
SHK95219.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
   
 
  0.842
SHJ96545.1
Glutamine synthetase.
   
 
  0.811
SHK51626.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
  0.809
SHK07743.1
Gamma-glutamylmethylamide synthetase; Belongs to the glutamine synthetase family.
   
 
  0.802
SHK95259.1
L-proline dehydrogenase.
   
 
  0.725
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
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