Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK43803.1 | SHL34672.1 | SAMN05443637_106134 | SAMN05443637_12527 | Helix-turn-helix domain-containing protein. | Transcriptional regulator, TetR family. | 0.424 |
SHK43803.1 | SHL41249.1 | SAMN05443637_106134 | SAMN05443637_12772 | Helix-turn-helix domain-containing protein. | Transcriptional regulator, TetR family. | 0.413 |
SHL34672.1 | SHK43803.1 | SAMN05443637_12527 | SAMN05443637_106134 | Transcriptional regulator, TetR family. | Helix-turn-helix domain-containing protein. | 0.424 |
SHL34672.1 | SHL41249.1 | SAMN05443637_12527 | SAMN05443637_12772 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.410 |
SHL41205.1 | SHL41236.1 | SAMN05443637_12770 | SAMN05443637_12771 | Hypothetical protein. | Aldehyde dehydrogenase family protein. | 0.697 |
SHL41205.1 | SHL41249.1 | SAMN05443637_12770 | SAMN05443637_12772 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.601 |
SHL41205.1 | SHL41277.1 | SAMN05443637_12770 | SAMN05443637_12773 | Hypothetical protein. | Ketosteroid isomerase-related protein. | 0.428 |
SHL41236.1 | SHL41205.1 | SAMN05443637_12771 | SAMN05443637_12770 | Aldehyde dehydrogenase family protein. | Hypothetical protein. | 0.697 |
SHL41236.1 | SHL41249.1 | SAMN05443637_12771 | SAMN05443637_12772 | Aldehyde dehydrogenase family protein. | Transcriptional regulator, TetR family. | 0.664 |
SHL41236.1 | SHL41277.1 | SAMN05443637_12771 | SAMN05443637_12773 | Aldehyde dehydrogenase family protein. | Ketosteroid isomerase-related protein. | 0.467 |
SHL41249.1 | SHK43803.1 | SAMN05443637_12772 | SAMN05443637_106134 | Transcriptional regulator, TetR family. | Helix-turn-helix domain-containing protein. | 0.413 |
SHL41249.1 | SHL34672.1 | SAMN05443637_12772 | SAMN05443637_12527 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.410 |
SHL41249.1 | SHL41205.1 | SAMN05443637_12772 | SAMN05443637_12770 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.601 |
SHL41249.1 | SHL41236.1 | SAMN05443637_12772 | SAMN05443637_12771 | Transcriptional regulator, TetR family. | Aldehyde dehydrogenase family protein. | 0.664 |
SHL41249.1 | SHL41277.1 | SAMN05443637_12772 | SAMN05443637_12773 | Transcriptional regulator, TetR family. | Ketosteroid isomerase-related protein. | 0.599 |
SHL41277.1 | SHL41205.1 | SAMN05443637_12773 | SAMN05443637_12770 | Ketosteroid isomerase-related protein. | Hypothetical protein. | 0.428 |
SHL41277.1 | SHL41236.1 | SAMN05443637_12773 | SAMN05443637_12771 | Ketosteroid isomerase-related protein. | Aldehyde dehydrogenase family protein. | 0.467 |
SHL41277.1 | SHL41249.1 | SAMN05443637_12773 | SAMN05443637_12772 | Ketosteroid isomerase-related protein. | Transcriptional regulator, TetR family. | 0.599 |