STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL45113.1Amino acid ABC transporter ATP-binding protein, PAAT family. (254 aa)    
Predicted Functional Partners:
SHL45080.1
Polar amino acid transport system permease protein.
 0.999
SHK24358.1
Glutamate transport system permease protein.
 
 0.983
SHK24379.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.983
SHK50395.1
Cystine transport system permease protein.
 0.978
SHL45056.1
Polar amino acid transport system substrate-binding protein.
 
 0.971
SHK18474.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.956
SHK18497.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.956
SHK24336.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.938
SHK44349.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.936
SHK50375.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.923
Your Current Organism:
Pseudonocardia thermophila
NCBI taxonomy Id: 1848
Other names: ATCC 19285, DSM 43832, IFO 15559, JCM 3095, NBRC 15559, VKM Ac-896
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.