STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB82107.1Tat pathway signal sequence domain protein; KEGG: rop:ROP_63010 8.8e-09 ribonuclease K07058; Psort location: CytoplasmicMembrane, score: 10.00. (425 aa)    
Predicted Functional Partners:
KXB81879.1
Hypothetical protein; KEGG: bde:BDP_0983 2.5e-29 TraG-like protein.
  
     0.649
KXB80969.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
  
     0.642
KXB79745.1
Hypothetical protein; KEGG: ase:ACPL_5512 3.4e-26 Regulator of nonsense transcripts-like protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.641
KXB80320.1
Hypothetical protein; KEGG: iva:Isova_2254 4.9e-13 FKBP-type peptidylprolyl isomerase; K01802 peptidylprolyl isomerase; Psort location: CytoplasmicMembrane, score: 9.55.
  
    0.606
KXB82105.1
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: cfi:Celf_2867 1.2e-68 mannose-1-phosphate guanylyltransferase.
       0.601
KXB80533.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.588
KXB79236.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.572
KXB81801.1
Hypothetical protein; KEGG: azl:AZL_005310 5.2e-06 ribonuclease E; K08300 ribonuclease E; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.551
KXB80482.1
DivIVA domain repeat protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.545
KXB82106.1
Transcriptional regulator, DeoR family; KEGG: lcb:LCABL_29260 2.6e-18 nadD; Nicotinic acid mononucleotide adenyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.535
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.