STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
KXB81753.1Putative Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (452 aa)    
Predicted Functional Partners:
KXB81752.1
Imelysin.
 
  
 0.993
KXB82146.1
FTR1 family protein; KEGG: ccv:CCV52592_0433 4.5e-13 fumarate hydratase class II K01679; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.918
KXB80333.1
Putative ATP synthase F0, A subunit; KEGG: ccv:CCV52592_0433 4.4e-48 fumarate hydratase class II K01679; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.874
KXB81751.1
Hypothetical protein.
       0.567
pheA
KEGG: cfl:Cfla_3187 5.0e-79 Prephenate dehydratase K04518; Psort location: Cytoplasmic, score: 9.97.
     
 0.523
KXB81754.1
KEGG: apb:SAR116_1990 2.7e-05 major facilitator superfamily protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.445
KXB79292.1
Twin arginine-targeting protein translocase, TatA/E family; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.412
KXB81634.1
Hypothetical protein; KEGG: nml:Namu_0125 1.2e-22 glutathione transferase K07393; Psort location: Cytoplasmic, score: 7.50.
      
 0.405
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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