STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81797.1KEGG: ecm:EcSMS35_4265 3.1e-79 N-acylglucosamine 2-epimerase; Psort location: Cytoplasmic, score: 7.50. (441 aa)    
Predicted Functional Partners:
KXB81539.1
Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides.
      0.891
KXB81796.1
Quinolinate phosphoribosyl transferase protein; KEGG: mmm:W7S_15035 2.8e-46 nicotinate-nucleotide pyrophosphorylase K00767; Psort location: Cytoplasmic, score: 9.97; Belongs to the NadC/ModD family.
       0.628
KXB81757.1
Kinase, PfkB family; KEGG: mcu:HMPREF0573_11505 3.2e-132 putative fructokinase; K00847 fructokinase; Psort location: Cytoplasmic, score: 7.50.
   
  0.566
KXB79360.1
Putative fructose transport system kinase; KEGG: pfr:PFREUD_01700 1.1e-26 CoA; pantothenate kinase; Psort location: Cytoplasmic, score: 7.50.
  
     0.542
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
    
 0.502
serS
serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.495
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
  0.475
KXB81600.1
Hypothetical protein; KEGG: ase:ACPL_7199 8.8e-11 yuaI-like N-acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.448
KXB79537.1
ROK family protein; KEGG: cfi:Celf_1033 4.6e-85 ROK family protein; K00886 polyphosphate glucokinase; Psort location: Cytoplasmic, score: 9.97.
 
  
  0.424
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
     0.421
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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