STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81821.1KEGG: heq:HPF32_0814 6.1e-74 hsdS_2; type I restriction-modification system specificity subunit; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 7.50. (375 aa)    
Predicted Functional Partners:
KXB81254.1
N-6 DNA Methylase; KEGG: fbr:FBFL15_2133 3.0e-17 putative modification methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.999
atpF
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.747
KXB81522.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.689
KXB80671.1
KEGG: rcp:RCAP_rcc01261 7.8e-09 res; type III restriction-modification system RcaSBIIP Res subunit; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.689
KXB79838.1
Hypothetical protein; KEGG: cds:CDC7B_2208 8.8e-13 hsdR; type I restriction enzyme EcoKI subunit R K01153.
  
 
 0.689
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.603
KXB81822.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.461
KXB79857.1
BRO family protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.440
KXB81823.1
Glycogen debranching enzyme GlgX; KEGG: mcu:HMPREF0573_11141 2.3e-202 putative isoamylase; K02438 glycogen operon protein; Psort location: Cytoplasmic, score: 9.67; Belongs to the glycosyl hydrolase 13 family.
       0.428
KXB81769.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.415
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.