STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81824.1KEGG: apb:SAR116_1870 4.0e-15 electron transfer flavoprotein subunit beta K03521; Psort location: Cytoplasmic, score: 7.50. (262 aa)    
Predicted Functional Partners:
KXB81825.1
KEGG: apb:SAR116_1869 1.4e-28 electron transfer flavoprotein subunit alpha K03522; Psort location: Cytoplasmic, score: 7.50.
 0.999
KXB80664.1
Hypothetical protein; KEGG: nmg:Nmag_0484 0.00036 monooxygenase FAD-binding protein; K00313 electron transfer flavoprotein-quinone oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
 
 0.998
KXB79264.1
FAD binding domain protein; KEGG: jde:Jden_2117 5.8e-275 D-lactate dehydrogenase K06911; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.929
KXB80662.1
FAD dependent oxidoreductase; KEGG: ahe:Arch_1354 2.6e-162 electron-transferring-flavoproteindehydrogenase K00313; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.897
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.862
KXB81012.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: mcu:HMPREF0573_10721 5.0e-221 gltD; glutamate synthase (NADPH) small subunit; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.840
KXB81826.1
KEGG: bcv:Bcav_1361 2.3e-65 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.67.
  
    0.835
KXB79284.1
Geranylgeranyl reductase family protein; KEGG: mbo:Mb0576c 1.7e-46 oxidoreductase K00540; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.835
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.822
KXB81032.1
Putative NADPH-ferredoxin reductase FprA; KEGG: ahe:Arch_1414 1.3e-160 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.819
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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