STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81851.1Sugar-binding domain protein; KEGG: bcv:Bcav_0794 3.1e-24 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.97. (347 aa)    
Predicted Functional Partners:
KXB80987.1
Dihydroxyacetone kinase, phosphotransfer subunit; KEGG: kfl:Kfla_6664 6.7e-123 phosphoenolpyruvate-protein phosphotransferase; K02768 PTS system, fructose-specific IIA component; K08483 phosphotransferase system, enzyme I, PtsI K11183; Psort location: Cytoplasmic, score: 10.00; Belongs to the PEP-utilizing enzyme family.
   
 
 0.847
KXB80722.1
Hypothetical protein; KEGG: bcv:Bcav_2877 1.1e-09 LacI family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
     0.694
KXB81852.1
Hypothetical protein.
       0.572
KXB81853.1
Transporter, major facilitator family protein; KEGG: bsd:BLASA_0568 0.0011 tmk; thymidylate kinase; K00943 dTMP kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.564
KXB81637.1
GTP cyclohydrolase II; KEGG: ske:Sked_18160 2.3e-115 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Psort location: Cytoplasmic, score: 7.50; In the N-terminal section; belongs to the DHBP synthase family.
    
   0.549
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
   0.485
pheT
phenylalanine--tRNA ligase, beta subunit; KEGG: mcu:HMPREF0573_10030 1.1e-255 pheT; phenylalanine--tRNA ligase K01890; Psort location: Cytoplasmic, score: 9.97; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.485
KXB80451.1
Phosphocarrier, HPr family; KEGG: gpo:GPOL_c21140 3.7e-19 ptsH; phosphocarrier protein HPr K11189; Psort location: Cytoplasmic, score: 10.00.
    
   0.463
KXB80452.1
Phosphocarrier, HPr family; KEGG: sen:SACE_6246 5.7e-23 phosphoenolpyruvate-protein phosphotransferase K05881; Psort location: Cytoplasmic, score: 7.50.
    
   0.463
KXB80450.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: bfa:Bfae_22320 1.2e-185 PTS system IIA component/PTS system IIB component/PTS system IIC component; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.447
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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