STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81900.1Hypothetical protein. (45 aa)    
Predicted Functional Partners:
KXB81901.1
Hypothetical protein.
       0.741
KXB81902.1
KEGG: ahe:Arch_0626 4.1e-84 riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.741
KXB81898.1
Glycerol-3-phosphate regulon repressor family protein; KEGG: ecx:EcHS_A4102 4.5e-23 DeoR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
       0.513
KXB81899.1
KEGG: bfa:Bfae_00830 2.3e-115 family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase; K01222 6-phospho-beta-glucosidase; Psort location: Cytoplasmic, score: 7.50.
       0.513
KXB81903.1
Putative Na+/H+ antiporter; KEGG: tgo:TGME49_105180 3.3e-19 sodium/hydrogen exchanger, putative; Psort location: CytoplasmicMembrane, score: 10.00.
       0.446
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.