STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81544.1HAD hydrolase, family IA, variant 3; KEGG: cne:CNM01370 4.4e-16 hypothetical protein; K01112; Psort location: Cytoplasmic, score: 7.50. (246 aa)    
Predicted Functional Partners:
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.793
KXB80313.1
HAD hydrolase, family IA, variant 3; KEGG: rdn:HMPREF0733_10532 2.1e-25 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 7.50.
  
     0.766
KXB81545.1
KEGG: tcu:Tcur_4029 8.0e-17 phosphotransferase system PTS EIIB protein; K02803 PTS system, N-acetylglucosamine-specific IIB component; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.762
KXB81635.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.753
KXB79264.1
FAD binding domain protein; KEGG: jde:Jden_2117 5.8e-275 D-lactate dehydrogenase K06911; Psort location: CytoplasmicMembrane, score: 8.78.
    
  0.748
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.716
KXB81636.1
KEGG: asa:ASA_0980 5.4e-43 ribC; riboflavin synthase subunit alpha K00793; Psort location: Cytoplasmic, score: 9.67.
   
 
  0.595
KXB81546.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: bbp:BBPR_0193 2.4e-10 1,2-A-L-fucosidase; Psort location: Cellwall, score: 9.25.
       0.481
KXB80226.1
HAD hydrolase, family IA, variant 3; KEGG: pop:POPTR_824722 1.0e-46 haloacid dehalogenase-like hydrolase family protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.471
KXB80535.1
KEGG: rsa:RSal33209_2410 8.7e-43 nucleotide pyrophosphatase; Psort location: CytoplasmicMembrane, score: 8.16.
  
  
  0.400
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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