STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80933.1Heavy metal-associated domain protein; KEGG: ssg:Selsp_1416 8.2e-07 copper-translocating P-type ATPase K01533; Psort location: Cytoplasmic, score: 7.50. (90 aa)    
Predicted Functional Partners:
KXB80985.1
Copper-exporting ATPase; KEGG: msp:Mspyr1_52570 8.1e-230 copper/silver-translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.976
KXB80442.1
KEGG: bbp:BBPR_0426 9.3e-181 fibronectin type III.
  
     0.572
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.528
KXB81801.1
Hypothetical protein; KEGG: azl:AZL_005310 5.2e-06 ribonuclease E; K08300 ribonuclease E; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.484
KXB80932.1
Hypothetical protein; KEGG: kfl:Kfla_2689 2.8e-07 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
       0.457
KXB82147.1
Transcriptional regulator, TetR family; KEGG: cnc:CNE_2c15950 0.0014 codA; cytosine deaminase; Psort location: Cytoplasmic, score: 7.50.
  
     0.453
KXB80445.1
Transglutaminase-like protein; KEGG: bya:BANAU_0585 6.8e-10 yebA; membrane-bound protease; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.449
KXB79745.1
Hypothetical protein; KEGG: ase:ACPL_5512 3.4e-26 Regulator of nonsense transcripts-like protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.433
KXB80931.1
KEGG: bcv:Bcav_3976 9.7e-163 adenylosuccinate lyase K01756; Psort location: Cytoplasmic, score: 7.50.
 
     0.429
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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