STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81003.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
KXB79372.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.685
KXB81001.1
Hypothetical protein; KEGG: fsy:FsymDg_0999 0.00057 serine/threonine protein kinase; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.598
KXB81000.1
Hypothetical protein; KEGG: dbr:Deba_0747 0.0037 membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease.
 
     0.590
KXB81673.1
Hypothetical protein; KEGG: plm:Plim_0588 0.00011 prolyl oligopeptidase K01322; Psort location: Cytoplasmic, score: 7.50.
  
     0.490
KXB81002.1
Hypothetical protein.
       0.464
KXB80538.1
Hypothetical protein; KEGG: pmq:PM3016_5551 0.0019 hypothetical protein; K06967 tRNA (adenine22-N1)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.442
KXB81633.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.436
KXB82089.1
Vitamin K epoxide reductase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.423
KXB82061.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.411
KXB81031.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.405
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.